Difference between revisions of "Team:Edinburgh/HeroinBiosensor"
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1.Rathbone, D. A., Holt, P. J., Lowe, C. R., & Bruce, N. C. (1997). Molecular analysis of the Rhodococcus sp. strain H1 her gene and characterization of its product, a heroin esterase, expressed in Escherichia coli. Applied and environmental microbiology, 63(5), 2062-2066. | 1.Rathbone, D. A., Holt, P. J., Lowe, C. R., & Bruce, N. C. (1997). Molecular analysis of the Rhodococcus sp. strain H1 her gene and characterization of its product, a heroin esterase, expressed in Escherichia coli. Applied and environmental microbiology, 63(5), 2062-2066. | ||
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2.Rathbone, D. A., HOLT, P. J., Lowe, C. R., & Bruce, N. C. (1996). The Use of a Novel Recombinant Heroin Esterase in the Development of an Illicit Drugs Biosensora. Annals of the New York Academy of Sciences, 799(1), 90-96. | 2.Rathbone, D. A., HOLT, P. J., Lowe, C. R., & Bruce, N. C. (1996). The Use of a Novel Recombinant Heroin Esterase in the Development of an Illicit Drugs Biosensora. Annals of the New York Academy of Sciences, 799(1), 90-96. | ||
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3.Mayer, K. M., & Arnold, F. H. (2002). A colorimetric assay to quantify dehydrogenase activity in crude cell lysates. Journal of biomolecular screening, 7(2), 135-140. | 3.Mayer, K. M., & Arnold, F. H. (2002). A colorimetric assay to quantify dehydrogenase activity in crude cell lysates. Journal of biomolecular screening, 7(2), 135-140. | ||
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4.Cameron, G. W., Jordan, K. N., Holt, P. J., Baker, P. B., Lowe, C. R., & Bruce, N. C. (1994). Identification of a heroin esterase in Rhodococcus sp. strain H1. Applied and environmental microbiology, 60(10), 3881-3883. | 4.Cameron, G. W., Jordan, K. N., Holt, P. J., Baker, P. B., Lowe, C. R., & Bruce, N. C. (1994). Identification of a heroin esterase in Rhodococcus sp. strain H1. Applied and environmental microbiology, 60(10), 3881-3883. | ||
Revision as of 13:21, 12 September 2015
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Heroin Biosensor
There are two key enzymes for a heroin biosensor which allow the quantity to be visualised, heroin esterase and morphine dehydrogenase. Heroin esterase, a serine esterase(1), de-acetylates the 6-acetylester group of heroin to produce 6-acetylmorphine. This process occurs a second time on the C-6 group producing morphine. The morphine produced is then oxidised to produce morphinone by the second enzyme morphine dehydrogenase. The NADP+ to NADPH reduction allows a coupled assay which usually includes FMN oxidoreductase and luciferase (2)). To make the biosensor produce colour to the visible eye, and not light, we incorporated Nitrotetrazolium Blue (NBT). NBT, when coupled with phenozine methosulfate, reacts with the NADPH produced to create an insoluble purple-blue formazan (3). The intensity of the formazan indicates the heroin purity.
Heroin esterase was isolated from Rhodococcus erythropolis strain H1 in 1994 from the garden soil at Cambridge and is able to use heroin as its sole carbon source (4). The gene her encodes this enzyme and can be taken from its host organism and can be expressed in the chassis Escherichia coli (1). The sequence for our enzyme used the original sequence from Rathbone, et al., and was then codon optimised for E. coli. The RFC25 prefix and suffix were added along which required all illegal sites (EcoRI, SpeI, AgeI, NotI, NgoMIV and XbaI) to be removed. As this was a difficult sequence to make as a gBlock, it was ordered as a gene in an ampicillin backbone where it was then digested and ligated into pSB1C3.
Morphine dehydrogenase was isolated from Pseudomonas putida M10 in 1993. It can oxidise morphine and only a few of the related morphine alkaloids (reference) allowing high specificity. The sequence was obtained from Willey, et al., for the structural gene morA. By codon optimizing the sequence for E. coli and adding the RFC25 prefix and suffix and getting rid of illegal restriction sites we were able to order the gBlock from IDT.
The idea for the heroin biosensor is to put crude cell extract of the two enzymes fused to CBDs to allow the enzymes to be immobilised on the paper. The mixture of the two lysates with nitrotetrazolium blue chloride freeze dried on the paper should allow the production of a blue color in the presence of heroin. How does Nitrotetrazolium blue chloride work? The intensity of the blue color depends on the concentration of heroin as it shows how much NADPH is being produced. Morphine and codeine are two major contaminants of heroin (reference) which will yield false positives on the biosensor as the morphine dehydrogenase can oxidize them thereby making NADPH not derived from heroin. This means that there will actually be two biosensors for heroin purity. One will have heroin esterase and morphine dehydrogenase. The other will have just morphine dehydrogenase. This will only produce a blue color if morphine and codeine are present on their own. The difference in colour intensity between these two should represent the heroin purity, this can be read and calculated by an app.
References
1.Rathbone, D. A., Holt, P. J., Lowe, C. R., & Bruce, N. C. (1997). Molecular analysis of the Rhodococcus sp. strain H1 her gene and characterization of its product, a heroin esterase, expressed in Escherichia coli. Applied and environmental microbiology, 63(5), 2062-2066.
2.Rathbone, D. A., HOLT, P. J., Lowe, C. R., & Bruce, N. C. (1996). The Use of a Novel Recombinant Heroin Esterase in the Development of an Illicit Drugs Biosensora. Annals of the New York Academy of Sciences, 799(1), 90-96.
3.Mayer, K. M., & Arnold, F. H. (2002). A colorimetric assay to quantify dehydrogenase activity in crude cell lysates. Journal of biomolecular screening, 7(2), 135-140.
4.Cameron, G. W., Jordan, K. N., Holt, P. J., Baker, P. B., Lowe, C. R., & Bruce, N. C. (1994). Identification of a heroin esterase in Rhodococcus sp. strain H1. Applied and environmental microbiology, 60(10), 3881-3883.