Difference between revisions of "Team:Austin UTexas/Project/Plasmid Study"

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<table style="width:70%">
+
<table style="width:90%">
  
 
   <tr>
 
   <tr>
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     <td><b><u>Fluorescent Protein</u></b></td>
 
     <td><b><u>Fluorescent Protein</u></b></td>
 
     <td><b><u>Promoter/RBS BioBrick</u></b></td>
 
     <td><b><u>Promoter/RBS BioBrick</u></b></td>
 +
    <td><b><u>Promoter;RBS Strength</u></b></td>
 
   </tr>
 
   </tr>
 
<tr></tr>
 
<tr></tr>
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     <td>BFP</td>
 
     <td>BFP</td>
 
     <td>BBa_K608004</td>
 
     <td>BBa_K608004</td>
 +
    <td>Strong; Weak</td>
 
   </tr>
 
   </tr>
 
<tr>
 
<tr>
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     <td>BFP</td>
 
     <td>BFP</td>
 
     <td>BBa_K608007</td>
 
     <td>BBa_K608007</td>
 +
    <td>Medium; Weak</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
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     <td>ECFP</td>
 
     <td>ECFP</td>
 
     <td>BBa_K608007</td>
 
     <td>BBa_K608007</td>
 +
    <td>Medium; Weak</td>
 
   </tr>
 
   </tr>
 
<tr>
 
<tr>
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     <td>ECFP</td>
 
     <td>ECFP</td>
 
     <td>BBa_K608003</td>
 
     <td>BBa_K608003</td>
 +
    <td>Strong; Medium</td>
 
   </tr>
 
   </tr>
 
<tr>
 
<tr>
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     <td>ECFP</td>
 
     <td>ECFP</td>
 
     <td>BBa_K608002</td>
 
     <td>BBa_K608002</td>
 +
    <td>Strong; Strong</td>
 
   </tr>
 
   </tr>
 
<hr>
 
<hr>
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     <td>YFP</td>
 
     <td>YFP</td>
 
     <td>BBa_K608002</td>
 
     <td>BBa_K608002</td>
 +
    <td>Strong; Strong</td>
 
   </tr>
 
   </tr>
 
<tr>
 
<tr>
Line 57: Line 64:
 
     <td>YFP</td>
 
     <td>YFP</td>
 
     <td>BBa_K608006</td>
 
     <td>BBa_K608006</td>
  </tr>
+
    <td>Medium; Medium</td> 
 +
</tr>
 
<tr>
 
<tr>
 
     <td>BBa_K592101</td>
 
     <td>BBa_K592101</td>
 
     <td>YFP</td>
 
     <td>YFP</td>
 
     <td>BBa_K608007</td>
 
     <td>BBa_K608007</td>
 +
    <td>Medium; Weak</td>
 
   </tr>
 
   </tr>
 
<tr>
 
<tr>
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     <td>SYFP2</td>
 
     <td>SYFP2</td>
 
     <td>BBa_K608002</td>
 
     <td>BBa_K608002</td>
 +
    <td>Strong; Strong</td>
 
   </tr>
 
   </tr>
 
  <tr>
 
  <tr>
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     <td>SYFP2</td>
 
     <td>SYFP2</td>
 
     <td>BBa_K314100</td>
 
     <td>BBa_K314100</td>
  </tr>
+
    <td>Strong; Very Strong</td>
 +
</tr>
 
<tr>
 
<tr>
 
     <td>BBa_K864100</td>
 
     <td>BBa_K864100</td>
 
     <td>SYFP2</td>
 
     <td>SYFP2</td>
 
     <td>BBa_K608006</td>
 
     <td>BBa_K608006</td>
 +
    <td>Medium; Medium</td>
 
   </tr>
 
   </tr>
 
<tr>
 
<tr>
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     <td>EYFP</td>
 
     <td>EYFP</td>
 
     <td>BBa_K608007</td>
 
     <td>BBa_K608007</td>
 +
    <td>Medium; Weak</td>
 
   </tr>
 
   </tr>
 
<tr>
 
<tr>
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     <td>EYFP</td>
 
     <td>EYFP</td>
 
     <td>BBa_K608006</td>
 
     <td>BBa_K608006</td>
  </tr>
+
     <td>Medium; Medium</td>
<tr>
+
</tr>
    <td>BBa_E0030</td>
+
    <td>EYFP</td>
+
     <td>BBa_K314100</td>
+
  </tr>
+
 
<tr>
 
<tr>
 
     <td>BBa_E0030</td>
 
     <td>BBa_E0030</td>
 
     <td>EYFP</td>
 
     <td>EYFP</td>
 
     <td>BBa_K314100</td>
 
     <td>BBa_K314100</td>
 +
    <td>Strong; Very Strong</td>
 
   </tr>
 
   </tr>
 
</table>
 
</table>

Revision as of 22:43, 13 September 2015

--this is a first draft--

Spring 2015 Data Set



Plasmid Construction and Transformation



Plasmids were constructed with standard BioBrick cloning procedures and enzymes. Composite plasmids were constructed using the following BioBrick combinations:



Fluorescent Protein BioBrick Fluorescent Protein Promoter/RBS BioBrick Promoter;RBS Strength
BBa_K592100 BFP BBa_K608004 Strong; Weak
BBa_K592100 BFP BBa_K608007 Medium; Weak
BBa_E0020 ECFP BBa_K608007 Medium; Weak
BBa_E0020 ECFP BBa_K608003 Strong; Medium
BBa_E0020 ECFP BBa_K608002 Strong; Strong
BBa_K592101 YFP BBa_K608002 Strong; Strong
BBa_K592101 YFP BBa_K608006 Medium; Medium
BBa_K592101 YFP BBa_K608007 Medium; Weak
BBa_K864100 SYFP2 BBa_K608002 Strong; Strong
BBa_K864100 SYFP2 BBa_K314100 Strong; Very Strong
BBa_K864100 SYFP2 BBa_K608006 Medium; Medium
BBa_E0030 EYFP BBa_K608007 Medium; Weak
BBa_EE030 EYFP BBa_K608006 Medium; Medium
BBa_E0030 EYFP BBa_K314100 Strong; Very Strong


discuss what these BioBricks are
plasmids transformed by electroporation into pSB1c3



Fluorescence Readings


Fig.2 ^^^REPLACE WITH BETTER RESOLUTION

relative fluorescence units
96 well plate
fluorescence data summary
summary figure(?)


Protocol