Difference between revisions of "Team:Stanford-Brown/Parts"
Line 31: | Line 31: | ||
<div class="row"> | <div class="row"> | ||
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692028" class="btn" id="be1" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692028</h4> | |
− | + | <p><b>cotz-aeBlue-CipA</b> the first step involved cloning a Bacillus construct in Escherichia coli of a fusion protein sequencing consisting of a spore coat protein, cotZ (building off work done on Sporobeads by the LMU Munich 2012 iGEM team), and a cellulose binding domain (CIPA). Additionally, we decided to add aeBlue, a chromogenic protein, between cotZ and CIPA to be able to see with the naked eye whether Bacillus is in a vegetative or a spore state. </p> | |
− | + | </a> | |
− | + | </div> | |
− | + | </div><!-- end row --> | |
− | <h2>Polystyrene Synthesis BioBricks</h2> | + | <h2>Polystyrene Synthesis BioBricks</h2> |
<div class="row"> | <div class="row"> | ||
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692007" class="btn" id="be1" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692007</h4> | |
− | + | <p><b>UbiX with T7 promoter and FLAG tag</b> UbiX is a flavin prenyltransferase that normally plays a role in ubiquinone biosynthesis in <i>E. coli</i>. UbiX transfers a prenyl group from dimethylallyl monophosphate (DMAP) to flavin mononucleotide (FMN), thereby creating a cofactor that happens to be essential to the functionality of FDC. Our genetic construct includes the FDC gene, a T7 inducible promoter, a ribosome binding site, and a FLAG-tag peptide sequence for easy and efficient protein purification. We have sequenced our construct and verified that all these components are indeed present. </p> | |
− | + | </a> | |
− | + | </div> | |
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692008" class="btn" id="be1" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692008</h4> | |
− | + | <p><b>Styrene Synthesis Operon</b> Combo Plasmid containing a fusion protein of all three enzymes required to synthesise styrene from the starting organic reagent L-Phenylalanine.</p> | |
− | + | </a> | |
− | + | </div> | |
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692000" class="btn" id="be1" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692000</h4> | |
− | + | <p><b>Ferulic acid decarboxylase</b> Ferulic Acid Decarboxylase is used to synthesize styrene from trans-cinnamic acid </p> | |
− | + | </a> | |
− | + | </div> | |
− | + | </div><!-- end row --> | |
− | + | <h2>P(3HB) Synthesis BioBricks</h2> | |
<div class="row"> | <div class="row"> | ||
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692020" class="btn" id="be1" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692020</h4> | |
− | + | <p><b>S. aureus type II PanK (CoaA)</b> Type II pantothenate kinase from <i>Staphylococcus aureus</i>, not sensitive to feedback inhibition from CoA. </p> | |
− | + | </a> | |
− | + | </div> | |
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692034" class="btn" id="be1" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692034</h4> | |
− | + | <p><b>Pank + hybrid phaCAB + lysis</b> Construct that was cloned to have P(3HB) producing <i>E. coli</i> cells lyse when induced with Arabinose. This would greatly facilitate P(3HB) extraction. We are currently still testing and characterizing this part. </p> | |
− | + | </a> | |
− | + | </div> | |
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692023" class="btn" id="be2" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692023</h4> | |
− | + | <p><b>Ptet + Luxl</b>Construct that was cloned to have P(3HB) producing <i>E. coli</i> cells lyse after reaching a certain population density using a quorum sensing promoter. This would greatly facilitate P(3HB) extraction. We are currently still testing and characterizing this part. </p> | |
− | + | </a> | |
− | + | </div> | |
− | |||
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692024" class="btn" id="be2" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692024</h4> | |
− | + | <p><b>Autolysis</b>Construct that was cloned to have P(3HB) producing <i>E. coli</i> cells lyse after reaching a certain population density using a quorum sensing promoter. The difference between this brick BBa_K1692023 is that the basic parts composing this gene are in a different order, which is part of our testing to optimize this system. This would greatly facilitate P(3HB) extraction. We are currently still testing and characterizing this part. </p> | |
− | + | </a> | |
− | + | </div> | |
− | + | </div><!-- end row --> | |
− | + | ||
+ | <h2>Cellulose Sheets BioBricks</h2> | ||
<div class="row"> | <div class="row"> | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | + | <div class="col-sm-6"> | |
+ | <a href="http://parts.igem.org/Part:BBa_K1692024" class="btn" id="be2" target="_blank"> | ||
+ | <h4>Biobrick: BBa_K1692027</h4> | ||
+ | <p><b>CipA</b>Cellulose binding domain adapted from Imperial 2014 iGEM team. Last part of our composite part BBa_BBa_K1692028. We removed the illegal EcoR1 site that the Imperial 2014 iGEM team had in their construc. </p> | ||
+ | </a> | ||
+ | </div> | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | + | </div><!-- end row --> | |
− | + | <h2>CRATER Briobricks</h2> | |
<div class="row"> | <div class="row"> | ||
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692033" class="btn" id="be1" target="_blank"> | |
− | + | <h4>Biobrick : BBa_K1692033</h4> | |
− | + | <p><b>RFP gDNA</b> This gene provides the intermediate for synthesizing gRNA targeting RFP (BBa_J04450). When used in conjuction with the CRISPR/Cas system, this gRNA will bind to and digest the RFP plasmid. </p> | |
− | + | </a> | |
− | + | </div> | |
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692030" class="btn" id="be2" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692030</h4> | |
− | + | <p><b>amilGFP yellow chromoprotein, RBS and promoter</b>This plasmid contains the amilGFP yellow chromoprotein gene from part BBa_K1033931 with the RBS and promoter from part BBa_K608002.</p> | |
− | + | </a> | |
− | + | </div> | |
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692031" class="btn" id="be2" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692031</h4> | |
− | + | <p><b>meffBlue blue chromoprotein with RBS and promoter</b>This plasmid contains the meffBlue blue chromoprotein gene found in the BBa_K1033902 part, with the RBS and promoter from part BBa_K608002.</p> | |
− | + | </a> | |
− | + | </div> | |
− | + | <div class="col-sm-6"> | |
− | + | <a href="http://parts.igem.org/Part:BBa_K1692032" class="btn" id="be2" target="_blank"> | |
− | + | <h4>Biobrick: BBa_K1692032</h4> | |
− | + | <p><b>amilCP blue chromoprotein with RBS and promoter</b>This plasmid contains the amilCP blue chromoprotein gene found in part BBa_K592009 and the RBS and promoter from part BBa_K608002.</p> | |
− | + | </a> | |
− | </div> | + | </div> |
+ | |||
+ | |||
+ | </div><!-- end row --> | ||
+ | |||
+ | |||
− | |||
</div><!-- end container --> | </div><!-- end container --> | ||
Line 171: | Line 167: | ||
</div><!-- end container --> | </div><!-- end container --> | ||
</footer> | </footer> | ||
− | + | ||
<!-- Bootstrap core JavaScript | <!-- Bootstrap core JavaScript | ||
================================================== --> | ================================================== --> |
Revision as of 00:55, 19 September 2015
Our Biobricks So many bricks
See our bricks below!
BioHYDRA BioBricks
Polystyrene Synthesis BioBricks
P(3HB) Synthesis BioBricks
Cellulose Sheets BioBricks
CRATER Briobricks