Difference between revisions of "Team:Freiburg/Project/pRIG15 17"

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The <a class="wikilink1" href="https://2015.igem.org/Team:Freiburg/Project/Diseases#AIDS" title="aids">Human immunodeficiency virus (HIV)</a> causes acquired immunodeficiency syndrome, AIDS, which leads to major impairments of the immunsystem. <sup><a class="fn_top" href="#fn__1" id="fnt__1" name="fnt__1">1)</a></sup> For our experiments we used a sequence coding for a recombinant protein that contains six epitopes from different proteins of the HI virus (HIV-1-trans-activating (tat) encoding region, one epitope of the reverse transcriptase, one of the p24 protein, one of the envelope protein gp41, one of gp120).<sup><a class="fn_top" href="#fn__2" id="fnt__2" name="fnt__2">2)</a></sup>
 
The <a class="wikilink1" href="https://2015.igem.org/Team:Freiburg/Project/Diseases#AIDS" title="aids">Human immunodeficiency virus (HIV)</a> causes acquired immunodeficiency syndrome, AIDS, which leads to major impairments of the immunsystem. <sup><a class="fn_top" href="#fn__1" id="fnt__1" name="fnt__1">1)</a></sup> For our experiments we used a sequence coding for a recombinant protein that contains six epitopes from different proteins of the HI virus (HIV-1-trans-activating (tat) encoding region, one epitope of the reverse transcriptase, one of the p24 protein, one of the envelope protein gp41, one of gp120).<sup><a class="fn_top" href="#fn__2" id="fnt__2" name="fnt__2">2)</a></sup>
 
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<a class="media" href="https://static.igem.org/mediawiki/2015/e/ea/Freiburg_labjournal-cloning-prig15_17.jpg" title="labjournal:cloning:prig15_17.jpg"><img alt="" class="mediacenter" src="https://static.igem.org/mediawiki/2015/e/ea/Freiburg_labjournal-cloning-prig15_17.jpg" width="500"/></a></div><strong>Figure 1: pRIG15_17.</strong> <a href="http://parts.igem.org/Part:BBa_K1621004" target="_blank">BBa_K1621004</a> inserted into the submission backbone pSB1C3.</div>
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                      <p><strong>Figure 1: pRIG15_17.</strong> <a href="http://parts.igem.org/Part:BBa_K1621004" target="_blank">BBa_K1621004</a> inserted into the submission backbone pSB1C3.</p>
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To insert the sequence for HIV tat/pol/gag/env into pSB1C3 we designed Gibson primers with compatible overhangs that also included the start codon ATG. This fragment was amplified via <a class="wikilink1" href="https://2015.igem.org/Team:Freiburg/Labjournals/Cloning/August#PCR6-18" title="PCR6-18">PCR</a> (Link zum Labjournal-Eintrag) and then assembled with the digested pSB1C3 backbone using Gibson assembly.
 
To insert the sequence for HIV tat/pol/gag/env into pSB1C3 we designed Gibson primers with compatible overhangs that also included the start codon ATG. This fragment was amplified via <a class="wikilink1" href="https://2015.igem.org/Team:Freiburg/Labjournals/Cloning/August#PCR6-18" title="PCR6-18">PCR</a> (Link zum Labjournal-Eintrag) and then assembled with the digested pSB1C3 backbone using Gibson assembly.
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We inserted the sequence coding for HIV tat/pol/gag/env into pET_22b+ for overexpression in <em>E.coli</em>. We could show interaction of the HIV tat/pol/gag/env antigen with a polyclonal anti-HIV-1 P24 antibody (Fig. 2)
 
We inserted the sequence coding for HIV tat/pol/gag/env into pET_22b+ for overexpression in <em>E.coli</em>. We could show interaction of the HIV tat/pol/gag/env antigen with a polyclonal anti-HIV-1 P24 antibody (Fig. 2)
 
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<div class="thumb2" style="width:310px"><div class="thumbinner"><a class="media" href="https://static.igem.org/mediawiki/2015/e/eb/Freiburg_labjournal-cloning-hiv_westernblot-1.png" title="labjournal:cloning:hiv_westernblot-1.png"><img alt="" class="mediabox2" src="https://static.igem.org/mediawiki/2015/e/eb/Freiburg_labjournal-cloning-hiv_westernblot-1.png" width="300"/></a></div><strong>Figure 2: Western Blot of <a href="http://parts.igem.org/Part:BBa_K1621004">HIV multi-epitopic antigen</a>.</strong> HIV multi-epitopic antigen was analyzed by 12,5% SDS-PAGE. The anti-HIV-1 P24 polyclonal antibody was used in a dilution of 1:5000. The secondary antibody (anti-rabbit HRP) was diluted 1:5000. The expected molecular weigth is 20.5 kDa.
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                      <p><strong>Figure 2: Western Blot of <a href="http://parts.igem.org/Part:BBa_K1621004">HIV multi-epitopic antigen</a>.</strong> HIV multi-epitopic antigen was analyzed by 12,5% SDS-PAGE. The anti-HIV-1 P24 polyclonal antibody was used in a dilution of 1:5000. The secondary antibody (anti-rabbit HRP) was diluted 1:5000. The expected molecular weigth is 20.5 kDa.</p>
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Revision as of 14:46, 14 September 2015

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pRIG15_17

The Human immunodeficiency virus (HIV) causes acquired immunodeficiency syndrome, AIDS, which leads to major impairments of the immunsystem. 1) For our experiments we used a sequence coding for a recombinant protein that contains six epitopes from different proteins of the HI virus (HIV-1-trans-activating (tat) encoding region, one epitope of the reverse transcriptase, one of the p24 protein, one of the envelope protein gp41, one of gp120).2)

Figure 1: pRIG15_17. BBa_K1621004 inserted into the submission backbone pSB1C3.

To insert the sequence for HIV tat/pol/gag/env into pSB1C3 we designed Gibson primers with compatible overhangs that also included the start codon ATG. This fragment was amplified via PCR (Link zum Labjournal-Eintrag) and then assembled with the digested pSB1C3 backbone using Gibson assembly. To prove correct insertion of our fragment we did a test digest and sent the whole plasmid for sequencing.

We inserted the sequence coding for HIV tat/pol/gag/env into pET_22b+ for overexpression in E.coli. We could show interaction of the HIV tat/pol/gag/env antigen with a polyclonal anti-HIV-1 P24 antibody (Fig. 2)

Figure 2: Western Blot of HIV multi-epitopic antigen. HIV multi-epitopic antigen was analyzed by 12,5% SDS-PAGE. The anti-HIV-1 P24 polyclonal antibody was used in a dilution of 1:5000. The secondary antibody (anti-rabbit HRP) was diluted 1:5000. The expected molecular weigth is 20.5 kDa.


Get the sequence in genebank format: BBa_K1621004.gb.