Difference between revisions of "Team:Czech Republic/Attributions"
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Revision as of 12:16, 18 September 2015
Attributions
Contents
The idea of IOD
Band began...
Team
The team include a mix of complementary expertise. In the end the work was naturally split between the members.
Jan Bejvl
Jan Bejvl assisted with modul 2 experiments, processed data for the Interlab Study and helped with the technical editing of wiki.
Martin Ciencala
Martin Ciencala was responsible for modul 3. He and Veronika Kolejaková designed, assembled and experimentally validated ........... Martin Ciencala also executed microfluidic experiments.
Hynek Kasl
Hynek Kasl was responsible for modul 1. He designed and assembled MATa and MATx synthetic loci, reporter plasmids and 3 biobricks, performed validation experiments and assays. He was in charge of mathematical modeling and found, prepared and explained the models used by the CeCe simulator for their implementation. Hynek made the presentation for young engineers and assisted during the Interlab Study experiments.
Veronika Kolejáková
Veronika Kolejaková worked in modul 3. She and Martin Cienciala designed, assembled and experimentally validated ........... She is also co-author of the interview with cancer specialist.
Jiří Louda
Jiří Louda performed search of provided literature for modul 2 and fabricated the microfludic chips.
Filip Nemcko
Václav Pelíšek
Václav Pelíšek extended the CeCe simulator by features crucial for IOD simulations: stochastic reactions, cell-cell communication and agglutination. He did all work on coding wiki design into HTML and CSS and fabricated the microfludic chips. Václav assisted during the Interlab Study experiments and with the lab's maintenance.
Anna Sosnová
Anna Sosnová was responsible for modul 2. She performed cloning, BioBrick construction and validation of the constructed parts. She was also responsible for performing the Interlab Study including construction of devices, measurements and processing of data. Anna was coordinator of collaboration with team Chalmers Gothenburg and responsible for collecting surveys.
Advisors
The advisors kept the work on track and helped answer the tough questions.
Jiří Fatka
Pavel Fikar
Kateřina Pěchotová
Kateřina Pěchotová was advisor of modul 2. She helped with the experimental setups. Kateřina also taught students how to operate with measurement devices. She is the person responsible for the lab's maintanence.
Tereza Puchrová
Tereza Puchrová was advisor of modul 1. She helped to answer all question related to yeast mating pheromone pathway, synthetic loci and reporter plasmids design and performance of validation experiments.
Pavel Zach
Pavel Zach was advisor of muodul 2. He provided literature and advices regarding chimeric receptors and synthetic pheromones. Pavel also supervised the Interlab Study experiments.
Instructors
MSc. Daniel Georgiev PhD
is the king of vector graphic, but that is not his most valuable quality. As our leader he keeps the great mood in the lab and his accurate questions leads everyone to the result without any need for explanation.
Doc. Ing. Janeček Eduard, CSc.
External help
Biomedical center
Faculty of Applied Sciences
Chalmers
Team Attributions
Major Attribution
MSc. Daniel Georgiev PhD
Is the king of vector graphic, but that is not his most valuable quality. As our leader he keeps the great mood in the lab and his accurate questions leads everyone to the result without any need for explanation.
Module 1
Individuals responsible for building the synthetic haploid strains:
Responsible students
- Hynek Kasl
Advisors
- Tereza Puchrová
Module 2
The people behind orthogonal signals:
Responsible students
- Anna Sosnová was responsible for cloning, BioBrick construction and validation of the constructed parts.
- Jan Bejvl asisted with experiments.
- Jiří Louda performed search of provided literature.
Advisors
- Pavel Zach provided literature and advices regarding chimeric receptors and synthetic pheromones.
- Kateřina Pěchotová helped with the experimental setups.
Module 3
The formation behind location tags.
Responsible students
- Martin Cienciala
- Veronika Kolejaková
Modeling
Responsible students
- Hynek Kasl is the person in charge of mathematical modeling.
Microfluidics
The people who realized microfludic experiments:
Responsible students
- Martin Ciencala executed microfluidic experiments.
- Václav Pelíšek and Jiří Louda fabricated the microfludic chips.
Advisors
- Pavel Fikar tought students the basics of microfludics and showed them how to use specialized equipment.
Software
The party responsible for improving the CeCe simulator by extensions needed for our project.
Responsible students
- Václav Pelíšek extended the CeCe simulator by features crucial for IOD simulations: stochastic reactions, cell-cell communication and agglutination.
- Hynek Kasl found, prepared and explained the models used by the simulator for their implementation.
Advisors
- Jíří Fatka is the original author of the CeCe simulator. He helped with understanding of the simulator architecture and extensions implementation.
Wiki Page
Those who make this awesome wiki:
Responsible students
- Václav Pelíšek did all work on coding wiki design into HTML and CSS.
Advisors
- Jiří Fatka was helpful in solving some complex HTML and CSS problems.
Human Practice
Responsible students
- Anna Sosnová is coordinator of collaboration with team Chalmers Gothenburg. She is responsible for collecting surveys and author of the interview.
- Veronika Kolejáková is co-author the interview.
- Hynek Kasl made the presentation for the Enginners.
Interlab study
Responsible students
- Anna Sosnová is the responsible for performing the Interlab study including construction of devices, measurements and processing of data.
- Hynek Kasl and Václav Pelíšek assisted during the experimets.
- Jan Bejvl assisted with the data processing
Advisors
- Kateřina Pěchotová taught students how to operate with measurement devices.
- Pavel Zach supervised the experiments.
Parts
Responsible students
- Anna Sosnová
- Jan Bejvl
Advisors
- Pavel Zach
Lab Support
- Kateřina Pěchotová is the person responsible for the lab's maintanence.
- Václav Pelíšek is assisting with the maintanence.