Team:Paris Bettencourt/Protocols/Gel Electrophoresis
Ferment It Yourself
iGEM Paris-Bettencourt 2O15
- Background
- Design
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Notebook
Vitamin A Vitamin B2 Vitamin B12 Phytase Riboswitch Differentiation on E. coli Differentiation on S. cerevisiae Manufacturing Idli and Micro-organisms Gel-Electrophoresis protocol
- Preparation of the Gel (50mL)
- Mix 0.5 grams of agarose with 50mL 0.5% TAE solution
- Heat the Erlenmeyer (conical flask) in a microwave until the liquid becomes totally transparent.
- Let it rest until you can take the Erlenmeyer in your hand without pain for 10 seconds.
- Add 5uL of SYBR® Safe (10000X) and mix gently until the solution homogenizes.
- Pour the liquid in a gel mold with the desired number of wells and wait 20-30 min (or until the gel is solidified).
- Put the gel inside the electrophoresis machine and pour TAE 0.5% until the gel is totally submerged.
- Preparation of the samples
- Mix 5uL of each sample with 1uL of 6X loading dye in microcentrifuge tubes (or any hydrophobic surface like parafilm)
- Pipette 5-6uL of each sample inside a different well.
- Pipette 5uL of the appropriate ladder in one of the wells (Some ladders have a dye in it, but some don't, so one has to add gel loading dye to these ones)
- Close the machine and launch the migration with the desired voltage
- After the desired migration time turn off the machine, remove the lid and put the gel inside the gel visualizer.
- Preparation of the Gel (50mL)