Difference between revisions of "Team:Aachen/Practices"
Line 1: | Line 1: | ||
{{Team:Aachen/Header}} | {{Team:Aachen/Header}} | ||
__NOTOC__ | __NOTOC__ | ||
− | = The broad scope of DIY Biology = | + | = Overview = |
+ | == The broad scope of DIY Biology == | ||
Following in the footsteps of iGEM Aachen 2014, we are building custom made [[Team:Aachen/Lab/Bioreactor/Hardware|hardware]] for custom made biology. Since there was no suitable design in any DIY platform (e.g. Hackteria.org, DIYBIO.ORG, Appropedia.org) we started to build our bioreactor system right from scratch. | Following in the footsteps of iGEM Aachen 2014, we are building custom made [[Team:Aachen/Lab/Bioreactor/Hardware|hardware]] for custom made biology. Since there was no suitable design in any DIY platform (e.g. Hackteria.org, DIYBIO.ORG, Appropedia.org) we started to build our bioreactor system right from scratch. | ||
While demonstrating our first prototype at the [[Team:Aachen/Practices/Maker_Faire|MakerFaire]] in Hannover, we were fascinated by the exhibited DIY Biology projects. | While demonstrating our first prototype at the [[Team:Aachen/Practices/Maker_Faire|MakerFaire]] in Hannover, we were fascinated by the exhibited DIY Biology projects. | ||
Line 28: | Line 29: | ||
<span style="color:transparent">a</span> | <span style="color:transparent">a</span> | ||
− | = Achievements = | + | <span style="color:transparent">a</span> |
+ | |||
+ | == Achievements == | ||
{{Team:Aachen/Achievements| | {{Team:Aachen/Achievements| | ||
* Gathering and implementing valuable feedback on our bioreactor system design at the MakerFaire and other occasions | * Gathering and implementing valuable feedback on our bioreactor system design at the MakerFaire and other occasions | ||
Line 38: | Line 41: | ||
<span style="color:transparent">a</span> | <span style="color:transparent">a</span> | ||
{{Team:Aachen/DoubleFigure|Aachen_Maker07.jpg|Aachen_Maker16.jpg|title1=Every age has an opinion on DIY Biology|title2=Initiation of our collaboration with the "Technik Garage" at the MakerFaire in Hannover}} | {{Team:Aachen/DoubleFigure|Aachen_Maker07.jpg|Aachen_Maker16.jpg|title1=Every age has an opinion on DIY Biology|title2=Initiation of our collaboration with the "Technik Garage" at the MakerFaire in Hannover}} | ||
+ | |||
+ | <span style="color:transparent">a</span> | ||
− | = Carrying on an Aachen tradition = | + | = MakerFaire = |
+ | == Carrying on an Aachen tradition == | ||
{{Team:Aachen/ReadMore|title=Go to Hardware|link=/Team:Aachen/Lab/Bioreactor/Hardware|picture=rmPumps|url=/wiki/images/0/08/Aachen_tile_Lab_Bioreactor_Hardware_Pumps.JPG}} | {{Team:Aachen/ReadMore|title=Go to Hardware|link=/Team:Aachen/Lab/Bioreactor/Hardware|picture=rmPumps|url=/wiki/images/0/08/Aachen_tile_Lab_Bioreactor_Hardware_Pumps.JPG}} | ||
Last year, the iGEM Team Aachen was invited to the annual MakerFaire in Hannover to exhibit their DIY measurement devices. This year, we went to the MakerFaire to demonstrate the first prototype of our self made '''small scale biorector''' to more than 5500 visitors per day. Thanks a lot to Carsten from the iGEM Team Braunschweig 2014 and to the Stratum Hackerspace for sharing their exhibition booth with us! | Last year, the iGEM Team Aachen was invited to the annual MakerFaire in Hannover to exhibit their DIY measurement devices. This year, we went to the MakerFaire to demonstrate the first prototype of our self made '''small scale biorector''' to more than 5500 visitors per day. Thanks a lot to Carsten from the iGEM Team Braunschweig 2014 and to the Stratum Hackerspace for sharing their exhibition booth with us! | ||
Line 47: | Line 53: | ||
<span style="color:transparent">a</span> | <span style="color:transparent">a</span> | ||
− | == Initiating our collaboration with the iGEM Team Bielefeld == | + | === Initiating our collaboration with the iGEM Team Bielefeld === |
{{Team:Aachen/ReadMore|title=Read More|link=/Team:Aachen/Collaborations#Bielefeld-CeBiTec|picture=rmBielefeld|url=/wiki/images/f/f7/Aachen_HumanPractice_MakerFaire_Bielefeld.jpg}} | {{Team:Aachen/ReadMore|title=Read More|link=/Team:Aachen/Collaborations#Bielefeld-CeBiTec|picture=rmBielefeld|url=/wiki/images/f/f7/Aachen_HumanPractice_MakerFaire_Bielefeld.jpg}} | ||
Before going to the MakerFaire, we stopped by at the iGEM Team Bielefeld. While having coffee and cake, each team presented their project followed by a little discussion and receiving feedback. | Before going to the MakerFaire, we stopped by at the iGEM Team Bielefeld. While having coffee and cake, each team presented their project followed by a little discussion and receiving feedback. | ||
Line 56: | Line 62: | ||
<span style="color:transparent">a</span> | <span style="color:transparent">a</span> | ||
− | == Teach the teacher == | + | === Teach the teacher === |
{{Team:Aachen/Figure|size=small|Aachen_Maker07.jpg|title=Fascination has no age}} | {{Team:Aachen/Figure|size=small|Aachen_Maker07.jpg|title=Fascination has no age}} | ||
The best part about the MakerFaire was when children at the age of twelve were fascinated by the bioreactor and tried their best to understand the working principles behind every part. | The best part about the MakerFaire was when children at the age of twelve were fascinated by the bioreactor and tried their best to understand the working principles behind every part. | ||
Line 73: | Line 79: | ||
<span style="color:transparent">a</span> | <span style="color:transparent">a</span> | ||
− | == First encounter with the Technik Garage == | + | === First encounter with the Technik Garage === |
{{Team:Aachen/ReadMore|title=Read More|link=/Team:Aachen/Practices/Community Labs|picture=rmTechnikgarage|url=/wiki/images/6/6c/Aachen_HumanPractice_Overview_TechnikGarage.jpg}} | {{Team:Aachen/ReadMore|title=Read More|link=/Team:Aachen/Practices/Community Labs|picture=rmTechnikgarage|url=/wiki/images/6/6c/Aachen_HumanPractice_Overview_TechnikGarage.jpg}} | ||
Apart from demonstrating our bioreactor, we had a look at all the amazing projects made by the other makers. It happended that we came across one the very few German Community Labs, the “Technik Garage”. Among other things, they built a pH-value system that automatically corrects the pH of a measured solution by pumping vinegar or diluted drain cleaner into the solution. Such as we do, they use rotation pumps. However, they used to buy pumps from the internet. That is why, they were really interested in our low-cost DIY pump design. | Apart from demonstrating our bioreactor, we had a look at all the amazing projects made by the other makers. It happended that we came across one the very few German Community Labs, the “Technik Garage”. Among other things, they built a pH-value system that automatically corrects the pH of a measured solution by pumping vinegar or diluted drain cleaner into the solution. Such as we do, they use rotation pumps. However, they used to buy pumps from the internet. That is why, they were really interested in our low-cost DIY pump design. | ||
Line 81: | Line 87: | ||
Since we had so many overlapping interests, we agreed to meet again. All of this inspired us to have a deeper look into the German [[Team:Aachen/Practices/Community_Labs|Community Lab]] scene. | Since we had so many overlapping interests, we agreed to meet again. All of this inspired us to have a deeper look into the German [[Team:Aachen/Practices/Community_Labs|Community Lab]] scene. | ||
− | = Conclusion = | + | == Conclusion == |
{{Team:Aachen/Figure|size=small|Aachen_Maker14.jpg|title=Team picture Maker Faire 2015}} | {{Team:Aachen/Figure|size=small|Aachen_Maker14.jpg|title=Team picture Maker Faire 2015}} | ||
'''Within three days we''' | '''Within three days we''' | ||
Line 93: | Line 99: | ||
To crown it all, the organization commitee of the MakerFaire surprisingly awarded us '''“Maker of Merit”''' for an extraordinary exhibition. That meant, we got invited to exhibit our bioreactor at the MakerFaire Berlin in October. Unfortunately, we cannot accept that offer since we will still be in the USA at that time... Nevertheless, this was clearly a highlight of our trip! | To crown it all, the organization commitee of the MakerFaire surprisingly awarded us '''“Maker of Merit”''' for an extraordinary exhibition. That meant, we got invited to exhibit our bioreactor at the MakerFaire Berlin in October. Unfortunately, we cannot accept that offer since we will still be in the USA at that time... Nevertheless, this was clearly a highlight of our trip! | ||
− | = Impressions of the MakerFaire = | + | == Impressions of the MakerFaire == |
{{Team:Aachen/DoubleFigure|Aachen_Maker02.jpg|Aachen_Maker05.jpg|title1=Thank you, Stratum Braunschweig!|title2=Thousands of interested visitors, thousands of interesting discussions}} | {{Team:Aachen/DoubleFigure|Aachen_Maker02.jpg|Aachen_Maker05.jpg|title1=Thank you, Stratum Braunschweig!|title2=Thousands of interested visitors, thousands of interesting discussions}} | ||
{{Team:Aachen/DoubleFigure|Aachen_Maker12.jpg|Aachen_Maker16.jpg|title1=No, this is not posed!|title2=Picture taken by the Technik Garage}} | {{Team:Aachen/DoubleFigure|Aachen_Maker12.jpg|Aachen_Maker16.jpg|title1=No, this is not posed!|title2=Picture taken by the Technik Garage}} | ||
+ | <span style="color:transparent">a</span> | ||
+ | |||
+ | <span style="color:transparent">a</span> | ||
− | = Exploring Community Labs = | + | = Community Labs = |
+ | == Exploring Community Labs == | ||
{{Team:Aachen/Video|mp4=/wiki/images/9/9f/Aachen_Vision-Film.mp4|title=Watch our Video to get to know more about the activities of our Community Lab project.|size=large}} | {{Team:Aachen/Video|mp4=/wiki/images/9/9f/Aachen_Vision-Film.mp4|title=Watch our Video to get to know more about the activities of our Community Lab project.|size=large}} | ||
Line 106: | Line 116: | ||
− | == Established in America - New to Europe == | + | === Established in America - New to Europe === |
{{Team:Aachen/Figure|size=small|Aachen_Maker07.jpg|title=Fascinated by DIY Hardware}} | {{Team:Aachen/Figure|size=small|Aachen_Maker07.jpg|title=Fascinated by DIY Hardware}} | ||
Across the USA, you will find a wide spread of Community Labs. These open labs allow thousands of people to experience and get an understanding of biology. Furthermore, they provide an open platform that promotes discussions about life sciences. In contrast, there is only a tiny number of Community Labs in Europe, which are only scarcely connected. | Across the USA, you will find a wide spread of Community Labs. These open labs allow thousands of people to experience and get an understanding of biology. Furthermore, they provide an open platform that promotes discussions about life sciences. In contrast, there is only a tiny number of Community Labs in Europe, which are only scarcely connected. | ||
Line 129: | Line 139: | ||
<span style="color:transparent">a</span> | <span style="color:transparent">a</span> | ||
− | = First evaluation of the growing Community Lab Scene = | + | <span style="color:transparent">a</span> |
+ | |||
+ | == First evaluation of the growing Community Lab Scene == | ||
− | == Pre-discussion with the iGEM Team Darmstadt == | + | === Pre-discussion with the iGEM Team Darmstadt === |
{{Team:Aachen/Figure|size=small|Aachen_CL10.jpg|title=iGEM Team Darmstadt in Aachen}} | {{Team:Aachen/Figure|size=small|Aachen_CL10.jpg|title=iGEM Team Darmstadt in Aachen}} | ||
Line 145: | Line 157: | ||
<span style="color:transparent">a</span> | <span style="color:transparent">a</span> | ||
− | == Discussions and Interviews at an interdisciplinary Symposium == | + | === Discussions and Interviews at an interdisciplinary Symposium === |
In June, we were invited to a symposium called '''''Synthetic Biology - Opportunities for interdisciplinary Research from Biology to Engineering'''''. We gladly accepted and presented our project to a broad spectrum of scientists. The following discussions lead to a huge amount of feedback on our bioreactor as well as our biological project. | In June, we were invited to a symposium called '''''Synthetic Biology - Opportunities for interdisciplinary Research from Biology to Engineering'''''. We gladly accepted and presented our project to a broad spectrum of scientists. The following discussions lead to a huge amount of feedback on our bioreactor as well as our biological project. | ||
Line 161: | Line 173: | ||
To sum up, by covering a variety of aspects concerning Community Labs we had now aquired enough background knowledge to meet a real Community lab. Fortunately, we already made friends with some members of the "Technik Garage", the Community Lab we had the pleasure to meet at the MakerFaire. | To sum up, by covering a variety of aspects concerning Community Labs we had now aquired enough background knowledge to meet a real Community lab. Fortunately, we already made friends with some members of the "Technik Garage", the Community Lab we had the pleasure to meet at the MakerFaire. | ||
− | = Meeting the Technik Garage - Passionate Makers = | + | == Meeting the Technik Garage - Passionate Makers == |
Being curious, how the reality matches our expectations, we invited the “Technik Garage”, a German Community Lab to visit us in Aachen. | Being curious, how the reality matches our expectations, we invited the “Technik Garage”, a German Community Lab to visit us in Aachen. | ||
Line 199: | Line 211: | ||
To get a second impression, idealy of a lab with quite distinct features, we decided to visit the Waag society, a famous Dutch Community Lab that offers a biohack academy. | To get a second impression, idealy of a lab with quite distinct features, we decided to visit the Waag society, a famous Dutch Community Lab that offers a biohack academy. | ||
− | = Meeting the Waag society - Infinite Possibilities = | + | == Meeting the Waag society - Infinite Possibilities == |
− | == Regular open Wetlab == | + | === Regular open Wetlab === |
We visited the Waag Society at one of the '''regular open Wetlab''' days. Every Tuesday evening, interested guests are invited to have a look at their FabLab as well as their biological lab and are encouraged to participate in various open discussions addressing a wide spectrum of scientific topics. | We visited the Waag Society at one of the '''regular open Wetlab''' days. Every Tuesday evening, interested guests are invited to have a look at their FabLab as well as their biological lab and are encouraged to participate in various open discussions addressing a wide spectrum of scientific topics. | ||
Line 215: | Line 227: | ||
<span style="color:transparent">a</span> | <span style="color:transparent">a</span> | ||
− | == DIY Biology in your own kitchen == | + | === DIY Biology in your own kitchen === |
{{Team:Aachen/Figure|size=small|Aachen_CL13.jpg|title=Discussing Bioart and the prospects of DIY Biology}} | {{Team:Aachen/Figure|size=small|Aachen_CL13.jpg|title=Discussing Bioart and the prospects of DIY Biology}} | ||
One central project of the Waag society is called the '''"BioHack Academy"'''. | One central project of the Waag society is called the '''"BioHack Academy"'''. | ||
Line 230: | Line 242: | ||
<div align="center"> - If you want to get to know more about our visit at the Waag Society, you fill find our respective blog entry [[Team:Aachen/Practices/Waag_Society#Meeting_the_Waag_society_-_Infinite_Possibilities|here]]. - </div> | <div align="center"> - If you want to get to know more about our visit at the Waag Society, you fill find our respective blog entry [[Team:Aachen/Practices/Waag_Society#Meeting_the_Waag_society_-_Infinite_Possibilities|here]]. - </div> | ||
− | = Conclusion = | + | == Conclusion == |
As our journey through the multifaceted world of Community Labs comes to an end, we completed it by having a concluding skype call with the people who accompanied us at the start, the members of the iGEM Team Darmstadt. | As our journey through the multifaceted world of Community Labs comes to an end, we completed it by having a concluding skype call with the people who accompanied us at the start, the members of the iGEM Team Darmstadt. | ||
Line 250: | Line 262: | ||
However, to promote the establishments of more Community Labs in Europe, we need to review the strict restrictions and increase connectivity through cross-linking networks like Medlife. | However, to promote the establishments of more Community Labs in Europe, we need to review the strict restrictions and increase connectivity through cross-linking networks like Medlife. | ||
− | = People involved = | + | == People involved == |
− | {| class="wikitable | + | {| class="wikitable" |
|- | |- | ||
! Name !! | ! Name !! | ||
Line 299: | Line 311: | ||
|} | |} | ||
+ | <span style="color:transparent">a</span> | ||
− | =Introduction= | + | = tubefront = |
+ | == Introduction == | ||
If you ask iGEM veterans about the organization of their freezers, you often get the same anwer: "chaotic". What if iGEMers would always know where to put and find their samples? Two organization paradigms are most popular: | If you ask iGEM veterans about the organization of their freezers, you often get the same anwer: "chaotic". What if iGEMers would always know where to put and find their samples? Two organization paradigms are most popular: | ||
* '''organization by <span style="color:#2850ad;">type</span>''' — e.g. putting all primers in one box | * '''organization by <span style="color:#2850ad;">type</span>''' — e.g. putting all primers in one box | ||
Line 313: | Line 327: | ||
Therefore we developed and deployed a mobile-first sample management system for humans. It solves the problem of sample identification and tracking without the need for expensive equipment. | Therefore we developed and deployed a mobile-first sample management system for humans. It solves the problem of sample identification and tracking without the need for expensive equipment. | ||
− | =[[File:Aachen_tubefront-logo.png|150px]]= | + | ==[[File:Aachen_tubefront-logo.png|150px]]== |
{{Team:Aachen/Achievements| | {{Team:Aachen/Achievements| | ||
* does not require additional equipment | * does not require additional equipment | ||
Line 330: | Line 344: | ||
{{Team:Aachen/Figure|Aachen_PracticesTubefrontStats.png|title=Total Samples During iGEM 2015|subtitle=In the beginning several samples from the previous year were added. Over the course of iGEM 2015, we have generated new samples at a rate of approximately 15.5 samples/day.||size=medium}} | {{Team:Aachen/Figure|Aachen_PracticesTubefrontStats.png|title=Total Samples During iGEM 2015|subtitle=In the beginning several samples from the previous year were added. Over the course of iGEM 2015, we have generated new samples at a rate of approximately 15.5 samples/day.||size=medium}} | ||
− | =Interface= | + | ==Interface== |
In the pictures below you can see how tubefront looks like on a mobile device. Of course, you can also use it on your laptop. | In the pictures below you can see how tubefront looks like on a mobile device. Of course, you can also use it on your laptop. | ||
Line 341: | Line 355: | ||
By adding tags, you can add more information that can also be filtered by in the search function. | By adding tags, you can add more information that can also be filtered by in the search function. | ||
− | =Tips and Tricks= | + | ==Tips and Tricks== |
Our experience shows that you should use tubefront-IDs for almost any sample/container that is stored for more than two days. This includes for example cryos of different clones, purified plasmids, purified PCR products etc. | Our experience shows that you should use tubefront-IDs for almost any sample/container that is stored for more than two days. This includes for example cryos of different clones, purified plasmids, purified PCR products etc. | ||
Line 369: | Line 383: | ||
{{Team:Aachen/Figure|Aachen_tubefrontHelp4.png|title=Wiki integration|subtitle=The tubefront integration template is included once at the bottom of a wiki page. tubefront IDs are marked with two # symbols.|size=medium}} | {{Team:Aachen/Figure|Aachen_tubefrontHelp4.png|title=Wiki integration|subtitle=The tubefront integration template is included once at the bottom of a wiki page. tubefront IDs are marked with two # symbols.|size=medium}} | ||
− | =References= | + | ==References== |
<references /> | <references /> | ||
− | =Overview= | + | |
+ | = Safety = | ||
+ | ==Overview== | ||
We regard safety regulations as a necessity for our own well being and the environment. A high-quality solution of a problem is of no value if the damaged created exceeds the benefits of the solution. | We regard safety regulations as a necessity for our own well being and the environment. A high-quality solution of a problem is of no value if the damaged created exceeds the benefits of the solution. | ||
Line 380: | Line 396: | ||
During the competition period we have collaborated and discussed about safety issues with many iGEM teams, but also with people from community labs and the industry. | During the competition period we have collaborated and discussed about safety issues with many iGEM teams, but also with people from community labs and the industry. | ||
− | ==Risks of our Biological Project== | + | ===Risks of our Biological Project=== |
Our project falls into the category of metabolic engineering and our genetically modified cells are not intended for any use outside of an industrial facility. | Our project falls into the category of metabolic engineering and our genetically modified cells are not intended for any use outside of an industrial facility. | ||
On the other hand, handling genetically modified organisms and methanol in a production facility does require several safety measures. | On the other hand, handling genetically modified organisms and methanol in a production facility does require several safety measures. | ||
Line 387: | Line 403: | ||
Not only did we discuss biosafety throughout our project, but we were also very aware of working responsibly and safely with methanol in our growth experiments. Learn more about it [https://2015.igem.org/Safety/Final_Safety_Form?team_id=1585| on our safety form]. | Not only did we discuss biosafety throughout our project, but we were also very aware of working responsibly and safely with methanol in our growth experiments. Learn more about it [https://2015.igem.org/Safety/Final_Safety_Form?team_id=1585| on our safety form]. | ||
− | ==Risks and Chances for Methanol in the Industry== | + | ===Risks and Chances for Methanol in the Industry=== |
Line 394: | Line 410: | ||
Consequently, there is the need to advance the methanol generating industry with a low proximity conversion system. This system will convert the methanol into a universal, complex, easy to handle and safe carbon source which is suited to be the starting point for a huge variety of industrial processes. As a result, the safety risks of using methanol are decreased remarkably while maintaining the high energy capacity of methanol. | Consequently, there is the need to advance the methanol generating industry with a low proximity conversion system. This system will convert the methanol into a universal, complex, easy to handle and safe carbon source which is suited to be the starting point for a huge variety of industrial processes. As a result, the safety risks of using methanol are decreased remarkably while maintaining the high energy capacity of methanol. | ||
− | =Use of Modern Devices in the Lab= | + | ==Use of Modern Devices in the Lab== |
Even though biological laboratories in Germany are tightly regulated, biosafety is still a major concern to the public. | Even though biological laboratories in Germany are tightly regulated, biosafety is still a major concern to the public. | ||
Line 429: | Line 445: | ||
The average numbers of colonies per agar chip show that keyboards are among the most contaminated surfaces in the lab. Smartphone touchscreens are equally contaminated as the cover of a paper lab notebook. But while it is easy to disinfect a touchscreen, you wouldn't spray disinfectant on your paper notebook. Taking this into consideration with the increased productivity, reproducability and safety, we think that paper-based documentation systems should be replaced by digital documentation methods. | The average numbers of colonies per agar chip show that keyboards are among the most contaminated surfaces in the lab. Smartphone touchscreens are equally contaminated as the cover of a paper lab notebook. But while it is easy to disinfect a touchscreen, you wouldn't spray disinfectant on your paper notebook. Taking this into consideration with the increased productivity, reproducability and safety, we think that paper-based documentation systems should be replaced by digital documentation methods. | ||
− | =Community labs and containment strategies= | + | ==Community labs and containment strategies== |
Community labs do not undergo stricter monitoring than commercial (industrial, analysis) or institutional laboratories. Although people have a higher suspicion towards community labs. | Community labs do not undergo stricter monitoring than commercial (industrial, analysis) or institutional laboratories. Although people have a higher suspicion towards community labs. | ||
Line 438: | Line 454: | ||
− | = Cooperation & Celebration = | + | = Collaborations = |
+ | == Cooperation & Celebration == | ||
During the course of our project, we had the pleasure to meet and collaborate with a great number of passionate and creative partners inside and outside of the iGEM community. On the one hand, we will elaborate all active collaborations with iGEM Teams and companies. On the other hand, we will name all iGEM teams we simply visited for some scientific exchange and having fun together. In short, this is the page of '''Cooperation & Celebration'''! | During the course of our project, we had the pleasure to meet and collaborate with a great number of passionate and creative partners inside and outside of the iGEM community. On the one hand, we will elaborate all active collaborations with iGEM Teams and companies. On the other hand, we will name all iGEM teams we simply visited for some scientific exchange and having fun together. In short, this is the page of '''Cooperation & Celebration'''! | ||
Line 458: | Line 475: | ||
<span style="color:transparent;">a</span> | <span style="color:transparent;">a</span> | ||
− | = Cooperation within iGEM = | + | == Cooperation within iGEM == |
− | == Future iGEM Team of the "Westfälische Hochschule" == | + | === Future iGEM Team of the "Westfälische Hochschule" === |
Quite at the start of our project, we were contacted by a group of students and their professor from the college from Recklinghausen. They are considering to participate in iGEM 2016 and had a lot of questions on how to build up an iGEM Team and manage an iGEM project. We were glad to welcome them in Aachen and answer all of their questions regarding BioBricks, judging and project organization. We hope that they will become part of iGEM next year and wish them all the best! | Quite at the start of our project, we were contacted by a group of students and their professor from the college from Recklinghausen. They are considering to participate in iGEM 2016 and had a lot of questions on how to build up an iGEM Team and manage an iGEM project. We were glad to welcome them in Aachen and answer all of their questions regarding BioBricks, judging and project organization. We hope that they will become part of iGEM next year and wish them all the best! | ||
Line 469: | Line 486: | ||
<span style="color:transparent;">a</span> | <span style="color:transparent;">a</span> | ||
− | == HS Slovenia - Biosafety == | + | === HS Slovenia - Biosafety === |
In cooperation with the [https://2015.igem.org/Team:Slovenia_HS| highschool-team from Slovenia], we have assessed the contamination level of different surfaces in the lab. A detailed description of these experiments is located on the [[Team:Aachen/Practices/Safety|safety page]]. | In cooperation with the [https://2015.igem.org/Team:Slovenia_HS| highschool-team from Slovenia], we have assessed the contamination level of different surfaces in the lab. A detailed description of these experiments is located on the [[Team:Aachen/Practices/Safety|safety page]]. | ||
<span style="color:transparent;">a</span> | <span style="color:transparent;">a</span> | ||
− | == University of Oslo - MDH Assays == | + | === University of Oslo - MDH Assays === |
When the project descriptions came online it became apparent that team [https://2015.igem.org/Team:UiOslo_Norway UiOslo] and we were working with a very similar methanol dehydrogenase. After some initial Skype calls where we discussed our projects, we started to collaborate on Mdh activity assays. Team Oslo did not have access to a microplate reader, but luckily we were able to find the optimal conditions for doing the [[Team:Aachen/Notebook/Protocols#Nash_Assay|Nash-Assay]] for formaldehyde detection. In addition to that, they built upon the methane sensor that we developed previously. | When the project descriptions came online it became apparent that team [https://2015.igem.org/Team:UiOslo_Norway UiOslo] and we were working with a very similar methanol dehydrogenase. After some initial Skype calls where we discussed our projects, we started to collaborate on Mdh activity assays. Team Oslo did not have access to a microplate reader, but luckily we were able to find the optimal conditions for doing the [[Team:Aachen/Notebook/Protocols#Nash_Assay|Nash-Assay]] for formaldehyde detection. In addition to that, they built upon the methane sensor that we developed previously. | ||
<span style="color:transparent;">a</span> | <span style="color:transparent;">a</span> | ||
− | == TU Darmstadt - Exploring the German Community Lab Scene == | + | === TU Darmstadt - Exploring the German Community Lab Scene === |
At the 12th of June, the iGEM Team Darmstadt came to visit us. Quite soon it became apparent that they seem to be in tune with us. As a consequence, collaborations on several levels arised. | At the 12th of June, the iGEM Team Darmstadt came to visit us. Quite soon it became apparent that they seem to be in tune with us. As a consequence, collaborations on several levels arised. | ||
Some weeks ago, we had offered them to use the first version of our lab organization software [[Team:Aachen/Practices/tubefront|tubefront]]. The [[Team:TU_Darmstadt/Collaborations/Testing|feedback]] that we got from team Darmstadt helped us to understand how we could improve our software. | Some weeks ago, we had offered them to use the first version of our lab organization software [[Team:Aachen/Practices/tubefront|tubefront]]. The [[Team:TU_Darmstadt/Collaborations/Testing|feedback]] that we got from team Darmstadt helped us to understand how we could improve our software. | ||
Line 502: | Line 519: | ||
<span style="color:transparent;">a</span> | <span style="color:transparent;">a</span> | ||
− | == Bielefeld-CeBiTec == | + | === Bielefeld-CeBiTec === |
{{Team:Aachen/Figure|size=small|Aachen_Maker01.jpg|title=Visiting the iGEM Team Bielefeld}} | {{Team:Aachen/Figure|size=small|Aachen_Maker01.jpg|title=Visiting the iGEM Team Bielefeld}} | ||
Line 511: | Line 528: | ||
Team [https://2015.igem.org/Team:Bielefeld-CeBiTec Bielefeld] was searching for different sources of water to test their genetically engineered machine. Therefore, we took two samples, one from a pont in a parc of our city and an additional sample from the famous warm sulfurous terrestrial spring, which was already the favourite place of Charlemagne the founder of Aachen. | Team [https://2015.igem.org/Team:Bielefeld-CeBiTec Bielefeld] was searching for different sources of water to test their genetically engineered machine. Therefore, we took two samples, one from a pont in a parc of our city and an additional sample from the famous warm sulfurous terrestrial spring, which was already the favourite place of Charlemagne the founder of Aachen. | ||
− | == Survey and tubefront Feedback from Team Heidelberg == | + | === Survey and tubefront Feedback from Team Heidelberg === |
In July, Michael visited team Heidelberg and introduced them to the prototype of [[Team:Aachen/Practices/tubefront|tubefront]]. At that point we were preparing a [[Team:Aachen/Practices/tubefront/Survey|survey on laboratory organization]] and the feedback by team Heidelberg helped a lot to improve the questions of the survey. On their [[Team:Heidelberg/Collaborations|collaborations page]] they also wrote a nice review of that early version of tubefront. | In July, Michael visited team Heidelberg and introduced them to the prototype of [[Team:Aachen/Practices/tubefront|tubefront]]. At that point we were preparing a [[Team:Aachen/Practices/tubefront/Survey|survey on laboratory organization]] and the feedback by team Heidelberg helped a lot to improve the questions of the survey. On their [[Team:Heidelberg/Collaborations|collaborations page]] they also wrote a nice review of that early version of tubefront. | ||
− | = Cooperation with industry = | + | == Cooperation with industry == |
{{Team:Aachen/Figure|size=small|Aachen_Col_08.jpg|title=Interview with Sunfire CTO Christian von Olshausen}} | {{Team:Aachen/Figure|size=small|Aachen_Col_08.jpg|title=Interview with Sunfire CTO Christian von Olshausen}} | ||
− | == Sunfire == | + | === Sunfire === |
The sunfire company was one of the reasons to go for our project. We first met them at the researchcenter in Jülich, where they convinced us with their efficient technical conversion of CO<sub>2</sub> and water to Methanol and other fuels. With such an efficienty, area independend way to get a sustainable, high energy chemical, it was a natural decision to find a way to integrate it into the bioeconomy. | The sunfire company was one of the reasons to go for our project. We first met them at the researchcenter in Jülich, where they convinced us with their efficient technical conversion of CO<sub>2</sub> and water to Methanol and other fuels. With such an efficienty, area independend way to get a sustainable, high energy chemical, it was a natural decision to find a way to integrate it into the bioeconomy. | ||
Line 530: | Line 547: | ||
{{Team:Aachen/Figure|size=small|Aachen_Col_01.jpg|title=visiting Cargill in Krefeld}} | {{Team:Aachen/Figure|size=small|Aachen_Col_01.jpg|title=visiting Cargill in Krefeld}} | ||
− | == Cargill == | + | === Cargill === |
Early in the project we visited a production plant of Cargill. They process around 2.000 tonnes of maize each day. | Early in the project we visited a production plant of Cargill. They process around 2.000 tonnes of maize each day. | ||
Line 541: | Line 558: | ||
{{Team:Aachen/Figure|size=small|Aachen_Col_03.jpg|title=MedLife summer event}} | {{Team:Aachen/Figure|size=small|Aachen_Col_03.jpg|title=MedLife summer event}} | ||
− | == MedLife == | + | === MedLife === |
Located in Aachen, there is a Life Sciences network called MedLife. Resulting from the fusion of a biotechnological and a biomedical network, the represent several memebers from the industry and universal research. Together with several partners they especially support Start ups but also global player like Bayer or Philips. We started to collaborate with them to get contact to possible sponsors, but soon recognized the immense greater potential. With their support, we could not only find new applications for our product, but also found a great way to connect community labs with other partners in the Life Science. They even invited us to their smmer event, where we met a lot of interesting people and partner for the future. | Located in Aachen, there is a Life Sciences network called MedLife. Resulting from the fusion of a biotechnological and a biomedical network, the represent several memebers from the industry and universal research. Together with several partners they especially support Start ups but also global player like Bayer or Philips. We started to collaborate with them to get contact to possible sponsors, but soon recognized the immense greater potential. With their support, we could not only find new applications for our product, but also found a great way to connect community labs with other partners in the Life Science. They even invited us to their smmer event, where we met a lot of interesting people and partner for the future. | ||
<span style="color:transparent;">a</span> | <span style="color:transparent;">a</span> | ||
− | == Stora Enzo == | + | === Stora Enzo === |
We got into contact with the paper industry through the MedLife network. As on of the main customers for starch in the industry, they were especially interested in our process. We were visited by two employees of Stora Enso, Heiner Grussenmeyer (chemical process engineering) and Kathrin Berger (paper manufactoring). We discussed the properties of paper starch and possible collaborations. They offered us to test our produced glycogen if it is suitable for the paper industry. Unfortunately, we didn't get any results before the jamboree. | We got into contact with the paper industry through the MedLife network. As on of the main customers for starch in the industry, they were especially interested in our process. We were visited by two employees of Stora Enso, Heiner Grussenmeyer (chemical process engineering) and Kathrin Berger (paper manufactoring). We discussed the properties of paper starch and possible collaborations. They offered us to test our produced glycogen if it is suitable for the paper industry. Unfortunately, we didn't get any results before the jamboree. | ||
− | = Celebration = | + | == Celebration == |
− | == Marburg - Meet up == | + | === Marburg - Meet up === |
We followed the invitation of the iGEM Team Marburg and went for their Meet up with six students of our team. During the weekend we had a lot of fun meeting the other iGEM Teams, racing in canoes and enjoying a great barbecue and music. Of course we also talked a lot about the project of each team and tried to support other teams as good as possible. Many collaborations were turned up during the Meet up. One of them was the collaboration with Team Göttingen. | We followed the invitation of the iGEM Team Marburg and went for their Meet up with six students of our team. During the weekend we had a lot of fun meeting the other iGEM Teams, racing in canoes and enjoying a great barbecue and music. Of course we also talked a lot about the project of each team and tried to support other teams as good as possible. Many collaborations were turned up during the Meet up. One of them was the collaboration with Team Göttingen. | ||
Line 563: | Line 580: | ||
{{Team:Aachen/Figure|size=small|Aachen_Col_02.jpg|title=visiting iGEM Amsterdam}} | {{Team:Aachen/Figure|size=small|Aachen_Col_02.jpg|title=visiting iGEM Amsterdam}} | ||
− | == iGEM Team Amsterdam == | + | === iGEM Team Amsterdam === |
Since the iGEM Team Amsterdam and we are tackling the same problem, we decided to visit them and have a look at their solution. During the few hours we spend with them, we got to know a very likeable team that did a great job in working out their solution. | Since the iGEM Team Amsterdam and we are tackling the same problem, we decided to visit them and have a look at their solution. During the few hours we spend with them, we got to know a very likeable team that did a great job in working out their solution. | ||
Line 570: | Line 587: | ||
<span style="color:transparent;">a</span> | <span style="color:transparent;">a</span> | ||
− | == Team Mexico == | + | === Team Mexico === |
In August, Roger Rubio from this year's TecCEM Collegiate Team Mexico City visited us in our lab. We talked a lot about our projects and showed him how we organize our labwork in [[Team:Aachen/Practices/tubefront|tubefront]]. Furthermore, we discussed the public perception of synthetic biology in Germany and Mexico and saw many similarities. Amazed about how iGEM brings people from totally different places together, we finished our gathering with a dinner in town. | In August, Roger Rubio from this year's TecCEM Collegiate Team Mexico City visited us in our lab. We talked a lot about our projects and showed him how we organize our labwork in [[Team:Aachen/Practices/tubefront|tubefront]]. Furthermore, we discussed the public perception of synthetic biology in Germany and Mexico and saw many similarities. Amazed about how iGEM brings people from totally different places together, we finished our gathering with a dinner in town. | ||
− | = Celebrating the Success of the iGEM Team Sumbawagen 2014 = | + | == Celebrating the Success of the iGEM Team Sumbawagen 2014 == |
'''Follow up of last year´s collaboration between Aachen and Sumbawagen''' | '''Follow up of last year´s collaboration between Aachen and Sumbawagen''' |
Revision as of 22:46, 18 September 2015
- ↑ www.methanex.com/sites/default/files/safety/what-is-methanol/Mx-Safe-Handling-Eng.pdf
- ↑ https://2015.igem.org/Team:Slovenia_HS
- ↑ http://technik-garage.de/ (German)
- ↑ https://2015.igem.org/Team:Paris_Saclay