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Revision as of 11:48, 13 September 2015

What is this site about?

We, the iGEM Team Heidelberg 2015 have developed a software, that can calculate aptamer sequences for virtually any molecule with a known crystal structure. Read more about the software here (LINK) and inform yourself about the project itself here (LINK). Table below displays the requests that have already arrived us.
Processing time may vary depending on the grade of preprocessing required. Please read instruction below for further information.

Need an aptamer?

Use this form to send a request for an aptamer. Please read the intructions listed below on how to modify the .pdb file before.

Ligand Name:

Name or institution:

Email to notify:

.pdb file of ligand:

Overview of requests

Requester Ligand .pdb file Aptamere sequence Status
iGEM Heidelberg 2015 Ketamin CCACCC; CCGATG; GGGATT Done
iGEM Michigan 2015 Kanamycin TTCTCTC; CGGGGAT; CGGGGGT; GCTGTCG Evaluated
iGEM Heidelberg 2015 p53 AAGGTGGG; TTCTGGGTGTG; TTCTGGGTGTT; TTAATGATATGTC; TTAATGATATCAT; TTAATGATATAGT; TTAATGATCGGGT; TTAATGATCGGGA Evaluated
iGEM Michigan 2015 L-Lactate dehydrogenase Calculating
Division of Optical Nanoscopy, dkfz Vimentin Pending
iGEM Heidelberg 2015 SaCas9 ATAGGTGGAAAGGGGCGT; ATAGGTGGAAAGGGGCGG Done
Dr. Stefan Kallenberger Actin ACGTCCTTTGAGGGAC Done
iGEM Heidelberg 2014 Xylanase Pending
Prof. Dr. Michael Wink Ranalexin Pending
Dr. Holger Schäfer Snakin-2 Pending