Team:HKUST-Rice/Phosphate Sensor

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Phosphate Sensor - phoAp , phoBRp

Potassium sensor - Modeling

Nitrate sensor (p_dcuS)

Introduction

Phosphorus plays an essential role in plant growth. It associates with various growth factors for root development, seed production, etc. Deficiency in phosphorus leads to stunted plant growth, yet the symptoms are not obvious. Therefore, it is important to monitor the levels of both the organic and inorganic phosphorus level in soil for healthy plant growth.

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Phosphate sensor Design

Escherichia coli (E. coli) detects inorganic phosphate (P(i)) from the environment by the PhoR/PhoB two-component system (Hsieh & Wanner, 2010). As illustrated in Figure 1, phoAp and phoBRp is cross-regulated by PhoB and PhoR. The sensory histidine kinase PhoR behaves either as an activator or inactivator for PhoB depending on different states (inhibition state, activation state, deactivation state). When phosphate is limited, PhoR act as a phospho-donor for the autophosphorylation of PhoB. The phosphorylated PhoB will directly activate phoAp and phoBRp. In contrast, when there is phosphate, PhoR interferes with phosphorylation of PhoB which in turn inactivates both phoAp and phoBR.

With the phosphate (Pho) regulon from E. coli,it can be utilized for detecting phosphate level. phoAp and phoBR from E. coli strain DH10B was cloned and ligated with the GFP generator (pSB1C3-BBa_I13504) respectively. Under high phosphate concentrations, repression on the green fluorescence intensity is expected; while under low phosphate concentrations, expression on green fluorescence is expected.

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Experiments performed

We characterized pSB1C3-PphoA-BBa_I13504 using Luria Broth (LB) medium. Quantitative characterization on the promoter was done by measuring the fluorescence signal intensity using an EnVision multilabel reader.

E. coli strain DH10B was used, and the concentration of the characterization of P_phoA was from 0 to 300 µM phosphate, with intervals of 50 µM.

Please visit Phosphate sensor Experiment Protocol for more details

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Results

Characterization on the constructs (BBa_K1682013) was done using M9 minimal medium (without phosphate). Quantitative characterization on the promoters were done by measuring the fluorescence signal intensity using an EnVision multilabel reader.

The results were obtained by combining the 3 characterization results together.

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References

Hsieh, Y. J., & Wanner, B. L. (2010). Global regulation by the seven-component P i signaling system. Current opinion in microbiology, 13(2), 198-203.